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Examples
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The rationale would be that selection for translational robustness could constraint codon usage near a phosphorylation site when compared with other Serine or Threonine sites.
Translationally optimal codons do not appear to significantly associate with phosphorylation sites Pedro Beltrao 2009
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This means that there is a significant positive correlation between the fraction of phosphorylated Serine and Threonine sites and gene expression.
Translationally optimal codons do not appear to significantly associate with phosphorylation sites Pedro Beltrao 2009
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Threonine: Cows milk is the major source of this amino acid.
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This means that there is a significant positive correlation between the fraction of phosphorylated Serine and Threonine sites and gene expression.
Archive 2009-08-01 Pedro Beltrao 2009
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The rationale would be that selection for translational robustness could constraint codon usage near a phosphorylation site when compared with other Serine or Threonine sites.
Archive 2009-08-01 Pedro Beltrao 2009
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I have used the GPS 2.0 predictor on the S. cerevisiea proteome with medium cutoff and including only Serine/Threonine kinases.
Archive 2008-05-01 Pedro Beltrao 2008
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Threonine – The main sources of threonine are carrots, green leafy vegetables, alfalfa and papaya.
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I have used the GPS 2.0 predictor on the S. cerevisiea proteome with medium cutoff and including only Serine/Threonine kinases.
Prediction of phospho-proteins from sequence Pedro Beltrao 2008
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For example, there are four codons encoding for Threonine, ACA, ACT, ACG and ACC; however, one species may prefer ACA to encode Threonine whereas the other species may encode Threonine using ACG preferenitally.
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Asparagine 27 130 154 170 Threonine 30 119 132 188 Serine 41 157 186 232 Glutamine 62 249 311 381
Chapter 20 1979
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